Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916430.1_cds_XP_016466140.1_59025
CDS Infomation

[gene=LOC107788917] [db_xref=GeneID:107788917] [protein=uncharacterized protein LOC107788917] [partial=3'] [protein_id=XP_016466140.1] [location=complement(join(<5..112,329..449,550..713,5060..5173,5258..5363,5485..5572,5814..6119,6201..6319,6428..6562,6642..6716,6844..7085,8799..9434,9671..9718))] [gbkey=CDS]
Sequence

ATGTTCACTGAGGGTCTTGATAACAACGCCCTCAAGTGGGTTAGAGAGGGTTCTGGGCAG
CAGACAAAGGAAATTCCTTACTCTATTTCAAGCCAAAGATCAAGAATTGATCCTATTGGC
AGCATGAGAAATGGCAGCCGCAATGTTGGACTTCCACCACCTTCCAAATTCCGTAGTGGC
CATTTATCAGGAGTTATTCCGGTATCTAGAGTTATTCCTGGAGATTTAGATGAAAGTGCA
TCAGCTTCTGATAATGACATGATCACTGACTCGGAAGAGGAGGTTTATGGGGGAAGATAC
TCACTGGATTCATCACCACACGATGATAGAATTCCTAGCACTACTGCAGCCACTCAAAGA
TATTACAATCTCCCACAAAGGCGTGCTGCTGCGCTGTATGCAAGTGACAGTGTGTACTCT
GATGATGTTAGTTCGTCGATGGAGACGTTGGGGAGAGGTCGTGGATATGTGGCCGATAGA
TTGATGAGAGGAGCTAATAGATATCCAATTGGAAGTAGTGTTTATACTGAGGAGGAATCT
TCTGATTCTGCTGCAAGCTCTGAGTTTTCCTCGACTCAAGTTGGGACCAATAATGGAACC
GTTCCACGATCAACAAATTATGCATCTGAGGGGTATGCTTCCAGCATTCCGTCAAGATTG
AATACAGGAAACAAGACTCAGAAGGATATGACCTCTGGGAATTTACAGAAGAAGGCCGCT
TCTGATGAAGAGGTTCCCAGTGCACCTCCATTTTGTAGTTCTGCTGCCGAAATCAAAGAA
GTTGATGAACGGGTCCCTGCCTCTAGTACAGTTAATGTGCAATCTACAGCAGAAGGTAGT
GGTCTCTCAACTAAGGCAAATAGTTACATTCCTTCTGGCTTAAATGACCAGGTCAAAGTT
CCAAATCATTCTGACTCACCTGTGAGGACGACTGCTGCTGCTGTAGAAAGTGGAGGACCT
TCGGGTTCTTATCCTGCTCGCCTTCCAACTTTTCATGCCAGTGCACTAGGGCCATGGCAT
CGTGTGCTTGCTTATGATGCGTGTGTTAGGCTTTGCCTGCATGCTTGGGCTAAGGGTTGC
TTGGAAGCTCCGATGTTCTTGGAGAGTGAATGTGCTCTCCTAAGGAATGCGTTTAGGTTA
CAACAAGTTCTATTACAATCAGAGGAGGAATTAATGGCAAATCGCTCTTCAGAGCTTCCT
AAGGAGGCGGCTGCCGCAAAACCTAAGCAAATGGTTGGAAAGATGAAGATCCAAGTTAGG
AAGGTTAAAATGGGCCTGGACCCACCTACTGGCTGCAGTTTTTCTTCCTTGAAAACACCA
ACAATAAAGATGGAATCTGTTAGATATCACCTATCAAATTTGCGGTCAACATTCTCTTCA
GGATGGCAAGCAGTTCGCAAAGTCCGTTTTGCTCCTCGTATGCCTGCAAATGGTTCATTC
TCGCGCCAGAGTTTGGCATATATGCAGGCGAGCACCCAATATATAAAGCAAGTTTCTGGA
CTCCTGAAAATTGGTGTGACATCTCTACGCAGCAGTCCATCGTCTTATGAAGTTTTTCAA
GAGACATACTATTGTTTATTACGACTAAAAAGTTCAATGGAAGAGGATGCTATAAAAATG
CAACCTGGATCAGGCGAAACCCACATTTTCTTTCCAGATAGTTTTGGAGATGACCTAATT
GTTGAAGTCCTGGATTCCAATGGAAAGCATTATGGCCGTGTCCTTGCTCAAGTCGCCACC
ATTGCTGAAGAACCGGGTGAGAAACTTCGATGGTGGTCTGTCTATCGTGAACCAGAGCAC
GAGTTTGTTGGCAAAGTACAACTCTTTATAAATTACTCAGCTACATTTGATGAAAATAGT
CATCTTAAGTGTGGTTCGGTTGCAGAAACTGTTGCTTATGACCTAGCACTTGAAGTTGCA
ATGAAGATTCAGCAATTCCAACAAAGAAACTTGACACTACATGGTCCTTGGAAATGGTTA
CTCACTGAGTTTGCATCATACTATGGAGTTTCTGATGCATATACTAGATTAAGGTACCTT
TCATATGTCATGGATGTCGCAACACCAACTGCTGATTGTCTTACAATTGTGCATGATCTT
TTGTTGCCTGTAATAATGAAGGGCCGTTCTAAGAGCACCCTCAGTCATCAAGAGAATCGT
ATTTTGGGGGAAGTTGAGGACCAGATTGAACAGATCTTTGCGATGGTTTTTGAAAACTAC
AAGTCATTGGATGAGTCAACACCATCAGGGATAATGGATGTT

Peptide Sequence

PEP ID

XP_016466140.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107788917, partial [Nicotiana tabacum]
Sequence

MFTEGLDNNALKWVREGSGQQTKEIPYSISSQRSRIDPIGSMRNGSRNVGLPPPSKFRSG
HLSGVIPVSRVIPGDLDESASASDNDMITDSEEEVYGGRYSLDSSPHDDRIPSTTAATQR
YYNLPQRRAAALYASDSVYSDDVSSSMETLGRGRGYVADRLMRGANRYPIGSSVYTEEES
SDSAASSEFSSTQVGTNNGTVPRSTNYASEGYASSIPSRLNTGNKTQKDMTSGNLQKKAA
SDEEVPSAPPFCSSAAEIKEVDERVPASSTVNVQSTAEGSGLSTKANSYIPSGLNDQVKV
PNHSDSPVRTTAAAVESGGPSGSYPARLPTFHASALGPWHRVLAYDACVRLCLHAWAKGC
LEAPMFLESECALLRNAFRLQQVLLQSEEELMANRSSELPKEAAAAKPKQMVGKMKIQVR
KVKMGLDPPTGCSFSSLKTPTIKMESVRYHLSNLRSTFSSGWQAVRKVRFAPRMPANGSF
SRQSLAYMQASTQYIKQVSGLLKIGVTSLRSSPSSYEVFQETYYCLLRLKSSMEEDAIKM
QPGSGETHIFFPDSFGDDLIVEVLDSNGKHYGRVLAQVATIAEEPGEKLRWWSVYREPEH
EFVGKVQLFINYSATFDENSHLKCGSVAETVAYDLALEVAMKIQQFQQRNLTLHGPWKWL
LTEFASYYGVSDAYTRLRYLSYVMDVATPTADCLTIVHDLLLPVIMKGRSKSTLSHQENR
ILGEVEDQIEQIFAMVFENYKSLDESTPSGIMDV

Transcript Sequence

Gene sequence data has not been registered.